Our publications

Below is a list of our team's publications, sorted by category. We constantly strive to be accessible and transparent.

Years of experience in scientific research and building a vast network of experts is what makes us so qualified to handle your microbiology needs.

Human microbiomes

Diversity, transmission and persistence of Escherichia coli in a cohort of mothers and their infants

de Muinck et al · Environmental Microbiology · 2011

Comparisons of infant Escherichia coli isolates link genomic profiles with adaptation to the ecological niche

de Muinck et al · BMC Genomics · 2013

Deep characterization of Escherichia coli in a cohort of mothers and their infants

de Muinck E. J. · University of Oslo, Doctoral thesis · 2013

Context-Dependent Competition in a Model Gut Bacterial Community

de Muinck et al · PLOS ONE · 2013

Biotic interactions and temporal dynamics of the human gastrointestinal microbiota

Trosvik et al · ISEMEJ · 2014

Saffold Virus, a Human Cardiovirus, and Risk of Persistent Islet Autoantibodies in the Longitudinal Birth Cohort Study MIDIA

Tapia et al · PLOS ONE · 2015

Ecology of bacteria in the human gastrointestinal tract—identification of keystone and foundation taxa

Trosvik et al · Microbiome · 2015

Linking Spatial Structure and Community-Level Biotic Interactions through Cooccurrence and Time Series Modeling of the Human Intestinal Microbiota

de Muinck et al · mSystems · 2017

Individuality and convergence of the infant gut microbiota during the first year of life

de Muinck et al · Nature Communications · 2018

Reduced abundance of Faecalibacterium prausnitzii in the gut microbiota of children diagnosed with cancer, a pilot study

de Muinck et al · Frontiers in Microbiomes · 2023

Antibiotic resistance gene dynamics in the commensal infant gut microbiome over the first year of life

Trosvik et al · Scientific Reports · 2024

Animal microbiomes

Within-species variation in the gut microbiome of medaka (Oryzias latipes) is driven by the interaction of light intensity and genetic background

Evangelista et al · Peer Community Journal · 2023

Gut microbiome biogeography in reindeer supersedes millennia of ecological and evolutionary separation

Kamenova et al · Microbial Ecology · 2023

Ecological plasticity in the gastrointestinal microbiomes of Ethiopian Chlorocebus monkeys

Trosvik et al · Scientific Reports · 2018

Multilevel social structure and diet shape the gut microbiota of the gelada monkey, the only grazing primate

Trosvik et al · Microbiome · 2018

Changes in the fecal microbiota in dogs with acute hemorrhagic diarrhea during an outbreak in Norway

Herstad et al · Journal of Veterinary Internal Medicine · Jul 21, 2021

Methods development

Microsatellite Length Scoring by Single Molecule Real Time Sequencing – Effects of Sequence Structure and PCR Regime

Liljegren et al · PLOS ONE · 2016

A novel ultra high-throughput 16S rRNA gene amplicon sequencing library preparation method for the Illumina HiSeq platform

de Muinck et al · Microbiome · 2017

High-throughput sequencing of insect specimens with sub-optimal DNA preservation using a practical, plate-based Illumina-compatible Tn5 transposase library preparation method

Cobb et al · PLOS ONES · 2024